- Reactivated and extended the filtering support around the yuidoc theme. One can now filter according to various entity states (deprecated, missing, mismatch, protected, ...) - filter.html.yuidoc: Refactored the checkbox battery into a proper template. - Fixed some typos in templates - library/lib/doc-assets/yuidoc/ac-js: Refined the checkbox/visibility mechanism to honour defaultChecked states of checkboxes. - library/lib/doc-assets/yuidoc/api.css: checkbox/visibility selectors are now based on composite class selectors. - Removed @modifier and related selection statements throughout the code. Background: The call-protection state is inferred during verification, so there is no need to actually declare a method protected. Also, filtering in the templates breaks orthogonality when it comes to rendering doc entities at various spots (leftbar, ...). Method filtering can be applied during the initial processing step or visually in the final output. - Added print names for per-object methods